PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PK06103.2
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
Family MYB_related
Protein Properties Length: 195aa    MW: 21926.7 Da    PI: 9.982
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PK06103.2genomeCCBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding28.34e-092553129
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIar 29
                     +++WT+eE+  l+ +v ++G g W+tI  
        PK06103.2 25 KQKWTAEEEAALKAGVIKHGAGKWRTILT 53
                     79*************************86 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.09E-92270IPR009057Homeodomain-like
PfamPF002497.1E-62552IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.2E-82570IPR009057Homeodomain-like
CDDcd116601.09E-122670No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    Send to blast
DSGSAEFDCP RTRRLFXLLL MGAPKQKWTA EEEAALKAGV IKHGAGKWRT ILTDPEFSSI  60
LHLRSNVDLK VSICKFLAVT VSKFQKSSVW MDDFMFLGPL TLFQLYYAFC IFQDHILFGS  120
DXDKWRNINV TAIWGSRQKA KLALKKNLPT PKLDNNPLAL VTVVQNVEEV VDAKPLAIAS  180
GTMRNTNSKE PNARX
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010102753.17e-60Histone H1
RefseqXP_008237830.11e-59PREDICTED: telomere repeat-binding factor 2
RefseqXP_008237823.11e-59PREDICTED: telomere repeat-binding factor 2
RefseqXP_008237815.11e-59PREDICTED: telomere repeat-binding factor 2
RefseqXP_008237807.11e-59PREDICTED: telomere repeat-binding factor 2
RefseqXP_007205635.11e-59hypothetical protein PRUPE_ppa009220mg
TrEMBLM5VZE61e-59M5VZE6_PRUPE; Uncharacterized protein
TrEMBLW9RUN77e-60W9RUN7_9R
STRINGGLYMA17G17370.13e-53(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF145333101
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67580.22e-32MYB_related family protein